[2025-09-25T11:09:40.526739] [QUERYOME] Starting research for query 83: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Are patients with diabetes receiving the same message from dietitians and nurses? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:09:40.599338] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Are patients with diabetes receiving the same message from dietitians and nurses? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:09:40.600992] Saving text to bench_final/run1/pubmedqa/pubmedqa_82/pi_initial_prompt.txt
[2025-09-25T11:09:40.615036] [PI] Calling o3 for initial analysis...
[2025-09-25T11:09:44.356855] [PI] Reasoning iteration 1
[2025-09-25T11:09:44.359132] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:09:44.360987] [PI] Function arguments: {'query': 'patients with diabetes receiving the same message from dietitians and nurses', 'k': 10, 'faiss_weight': 0.5, 'bm25_weight': 0.5, 'use_rrf': True}
[2025-09-25T11:09:44.364212] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-25T11:09:47.439660] [PI] Function hybrid_search executed successfully
[2025-09-25T11:09:47.442983] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-25T11:09:47.451331] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:10:07.279883] [PI] Reasoning iteration 2
[2025-09-25T11:10:07.281498] [PI] Executing function call 1: bm25_mesh_terms_search
[2025-09-25T11:10:07.284532] [PI] Function arguments: {'query': 'Are patients with diabetes receiving the same message from dietitians and nurses', 'k': 5}
[2025-09-25T11:10:07.286203] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_2_tool_call_2_bm25_mesh_terms_search.json
[2025-09-25T11:10:10.987013] [PI] Function bm25_mesh_terms_search executed successfully
[2025-09-25T11:10:10.989645] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_2_tool_result_2_bm25_mesh_terms_search.json
[2025-09-25T11:10:10.995888] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:10:19.039418] [PI] Reasoning iteration 3
[2025-09-25T11:10:19.040982] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:10:19.044470] [PI] Function arguments: {'query': '"Are patients with diabetes receiving the same message from dietitians and nurses"', 'k': 5, 'faiss_weight': 0.3, 'bm25_weight': 0.7, 'use_rrf': True}
[2025-09-25T11:10:19.046047] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_3_tool_call_2_hybrid_search.json
[2025-09-25T11:10:19.938636] [PI] Function hybrid_search executed successfully
[2025-09-25T11:10:19.940122] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_3_tool_result_2_hybrid_search.json
[2025-09-25T11:10:19.969253] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:10:27.086728] [PI] Reasoning iteration 4
[2025-09-25T11:10:27.089323] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:10:27.091376] [PI] Function arguments: {'query': '15095519', 'k': 5, 'faiss_weight': 0.4, 'bm25_weight': 0.6, 'use_rrf': True}
[2025-09-25T11:10:27.094505] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_4_tool_call_2_hybrid_search.json
[2025-09-25T11:10:28.313532] [PI] Function hybrid_search executed successfully
[2025-09-25T11:10:28.315758] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_82/pi_iteration_4_tool_result_2_hybrid_search.json
[2025-09-25T11:10:28.323541] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:10:34.613947] [PI] Reasoning iteration 5
[2025-09-25T11:10:34.615705] [PI] No function calls found in response
[2025-09-25T11:10:34.618904] [PI] No more function calls - research complete
[2025-09-25T11:10:34.620412] Saving text to bench_final/run1/pubmedqa/pubmedqa_82/pi_final_answer.txt
[2025-09-25T11:10:34.625473] [QUERYOME] Query completed successfully
