[2025-09-25T11:07:18.869177] [QUERYOME] Starting research for query 76: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Is there a favorable subset of patients with prostate cancer who develop oligometastases? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:07:18.941844] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Is there a favorable subset of patients with prostate cancer who develop oligometastases? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:07:18.944569] Saving text to bench_final/run1/pubmedqa/pubmedqa_75/pi_initial_prompt.txt
[2025-09-25T11:07:18.963872] [PI] Calling o3 for initial analysis...
[2025-09-25T11:07:22.932718] [PI] Reasoning iteration 1
[2025-09-25T11:07:22.934303] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:07:22.935940] [PI] Function arguments: {'query': 'favorable subset of patients with prostate cancer who develop oligometastases', 'k': 10, 'faiss_weight': 0.6, 'bm25_weight': 0.4, 'use_rrf': True}
[2025-09-25T11:07:22.938015] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_75/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-25T11:07:24.283111] [PI] Function hybrid_search executed successfully
[2025-09-25T11:07:24.285333] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_75/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-25T11:07:24.294649] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:07:28.075669] [PI] Reasoning iteration 2
[2025-09-25T11:07:28.077987] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:07:28.079715] [PI] Function arguments: {'query': '14697414', 'k': 1, 'faiss_weight': 0.1, 'bm25_weight': 0.9, 'use_rrf': False}
[2025-09-25T11:07:28.081298] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_75/pi_iteration_2_tool_call_2_hybrid_search.json
[2025-09-25T11:07:28.529041] [PI] Function hybrid_search executed successfully
[2025-09-25T11:07:28.530820] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_75/pi_iteration_2_tool_result_2_hybrid_search.json
[2025-09-25T11:07:28.536155] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:07:32.874844] [PI] Reasoning iteration 3
[2025-09-25T11:07:32.876412] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:07:32.879143] [PI] Function arguments: {'query': 'Is there a favorable subset of patients with prostate cancer who develop oligometastases abstract', 'k': 5, 'faiss_weight': 0.4, 'bm25_weight': 0.6, 'use_rrf': True}
[2025-09-25T11:07:32.880770] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_75/pi_iteration_3_tool_call_2_hybrid_search.json
[2025-09-25T11:07:33.399767] [PI] Function hybrid_search executed successfully
[2025-09-25T11:07:33.401339] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_75/pi_iteration_3_tool_result_2_hybrid_search.json
[2025-09-25T11:07:33.415748] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:07:44.568981] [PI] Reasoning iteration 4
[2025-09-25T11:07:44.570495] [PI] No function calls found in response
[2025-09-25T11:07:44.573610] [PI] No more function calls - research complete
[2025-09-25T11:07:44.575278] Saving text to bench_final/run1/pubmedqa/pubmedqa_75/pi_final_answer.txt
[2025-09-25T11:07:44.613367] [QUERYOME] Query completed successfully
