[2025-09-25T12:57:31.036088] [QUERYOME] Starting research for query 392: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Is neck pain associated with worse health-related quality of life 6 months later? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T12:57:31.109029] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Is neck pain associated with worse health-related quality of life 6 months later? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T12:57:31.112173] Saving text to bench_final/run1/pubmedqa/pubmedqa_391/pi_initial_prompt.txt
[2025-09-25T12:57:31.123443] [PI] Calling o3 for initial analysis...
[2025-09-25T12:57:36.047694] [PI] Reasoning iteration 1
[2025-09-25T12:57:36.050880] [PI] Executing function call 1: hybrid_search
[2025-09-25T12:57:36.052546] [PI] Function arguments: {'query': 'neck pain health-related quality of life 6 months later outcome neck pain cohort study', 'k': 10, 'faiss_weight': 0.6, 'bm25_weight': 0.4, 'use_rrf': True}
[2025-09-25T12:57:36.054409] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_391/pi_iteration_1_tool_call_3_hybrid_search.json
[2025-09-25T12:57:38.550639] [PI] Function hybrid_search executed successfully
[2025-09-25T12:57:38.552841] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_391/pi_iteration_1_tool_result_3_hybrid_search.json
[2025-09-25T12:57:38.562618] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T12:57:47.572411] [PI] Reasoning iteration 2
[2025-09-25T12:57:47.574151] [PI] No function calls found in response
[2025-09-25T12:57:47.577928] [PI] No more function calls - research complete
[2025-09-25T12:57:47.581697] Saving text to bench_final/run1/pubmedqa/pubmedqa_391/pi_final_answer.txt
[2025-09-25T12:57:47.587011] [QUERYOME] Query completed successfully
