[2025-09-25T10:53:14.701885] [QUERYOME] Starting research for query 38: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Does escalation of the apical dose change treatment outcome in beta-radiation of posterior choroidal melanomas with 106Ru plaques? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T10:53:14.783442] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Does escalation of the apical dose change treatment outcome in beta-radiation of posterior choroidal melanomas with 106Ru plaques? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T10:53:14.785062] Saving text to bench_final/run1/pubmedqa/pubmedqa_37/pi_initial_prompt.txt
[2025-09-25T10:53:14.791471] [PI] Calling o3 for initial analysis...
[2025-09-25T10:53:19.533805] [PI] Reasoning iteration 1
[2025-09-25T10:53:19.535338] [PI] Executing function call 1: hybrid_search
[2025-09-25T10:53:19.537842] [PI] Function arguments: {'query': 'escalation of the apical dose change treatment outcome beta-radiation posterior choroidal melanomas 106Ru plaques', 'k': 10, 'faiss_weight': 0.6, 'bm25_weight': 0.4, 'use_rrf': True}
[2025-09-25T10:53:19.539481] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_37/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-25T10:53:20.053577] [PI] Function hybrid_search executed successfully
[2025-09-25T10:53:20.055605] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_37/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-25T10:53:20.063807] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T10:53:27.051583] [PI] Reasoning iteration 2
[2025-09-25T10:53:27.054379] [PI] No function calls found in response
[2025-09-25T10:53:27.058281] [PI] No more function calls - research complete
[2025-09-25T10:53:27.059960] Saving text to bench_final/run1/pubmedqa/pubmedqa_37/pi_final_answer.txt
[2025-09-25T10:53:27.065821] [QUERYOME] Query completed successfully
