[2025-09-25T12:33:18.267214] [QUERYOME] Starting research for query 318: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
An HIV1/2 point of care test on sputum for screening TB/HIV co-infection in Central India - Will it work? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T12:33:18.341985] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
An HIV1/2 point of care test on sputum for screening TB/HIV co-infection in Central India - Will it work? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T12:33:18.343692] Saving text to bench_final/run1/pubmedqa/pubmedqa_317/pi_initial_prompt.txt
[2025-09-25T12:33:18.347977] [PI] Calling o3 for initial analysis...
[2025-09-25T12:33:27.232846] [PI] Reasoning iteration 1
[2025-09-25T12:33:27.234755] [PI] Executing function call 1: hybrid_search
[2025-09-25T12:33:27.237289] [PI] Function arguments: {'query': 'An HIV1/2 point of care test on sputum for screening TB/HIV co-infection in Central India', 'k': 10, 'faiss_weight': 0.5, 'bm25_weight': 0.5, 'use_rrf': True}
[2025-09-25T12:33:27.239602] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_317/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-25T12:33:30.787908] [PI] Function hybrid_search executed successfully
[2025-09-25T12:33:30.791534] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_317/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-25T12:33:30.799636] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T12:33:40.229082] [PI] Reasoning iteration 2
[2025-09-25T12:33:40.231456] [PI] No function calls found in response
[2025-09-25T12:33:40.232718] [PI] No more function calls - research complete
[2025-09-25T12:33:40.234378] Saving text to bench_final/run1/pubmedqa/pubmedqa_317/pi_final_answer.txt
[2025-09-25T12:33:40.239335] [QUERYOME] Query completed successfully
