[2025-09-25T12:29:28.858399] [QUERYOME] Starting research for query 303: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Does insulin resistance drive the association between hyperglycemia and cardiovascular risk? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T12:29:28.927425] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Does insulin resistance drive the association between hyperglycemia and cardiovascular risk? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T12:29:28.928969] Saving text to bench_final/run1/pubmedqa/pubmedqa_302/pi_initial_prompt.txt
[2025-09-25T12:29:28.934961] [PI] Calling o3 for initial analysis...
[2025-09-25T12:29:35.222557] [PI] Reasoning iteration 1
[2025-09-25T12:29:35.224022] [PI] Executing function call 1: hybrid_search
[2025-09-25T12:29:35.226803] [PI] Function arguments: {'query': 'Does insulin resistance drive the association between hyperglycemia and cardiovascular risk?', 'k': 5, 'faiss_weight': 0.6, 'bm25_weight': 0.4, 'use_rrf': True}
[2025-09-25T12:29:35.228444] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_302/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-25T12:29:35.797036] [PI] Function hybrid_search executed successfully
[2025-09-25T12:29:35.798628] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_302/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-25T12:29:35.822143] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T12:29:38.658610] [PI] Reasoning iteration 2
[2025-09-25T12:29:38.661397] [PI] Executing function call 1: hybrid_search
[2025-09-25T12:29:38.662950] [PI] Function arguments: {'query': '22720085 abstract', 'k': 3, 'faiss_weight': 0.4, 'bm25_weight': 0.6, 'use_rrf': False}
[2025-09-25T12:29:38.664584] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_302/pi_iteration_2_tool_call_2_hybrid_search.json
[2025-09-25T12:29:39.309450] [PI] Function hybrid_search executed successfully
[2025-09-25T12:29:39.311743] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_302/pi_iteration_2_tool_result_2_hybrid_search.json
[2025-09-25T12:29:39.317568] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T12:29:45.128882] [PI] Reasoning iteration 3
[2025-09-25T12:29:45.131555] [PI] No function calls found in response
[2025-09-25T12:29:45.133644] [PI] No more function calls - research complete
[2025-09-25T12:29:45.136200] Saving text to bench_final/run1/pubmedqa/pubmedqa_302/pi_final_answer.txt
[2025-09-25T12:29:45.141248] [QUERYOME] Query completed successfully
