[2025-09-25T11:49:27.634905] [QUERYOME] Starting research for query 188: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Cerebromediastinal tuberculosis in a child with a probable Say-Barber-Miller syndrome: a causative link? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:49:27.678261] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Cerebromediastinal tuberculosis in a child with a probable Say-Barber-Miller syndrome: a causative link? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:49:27.679940] Saving text to bench_final/run1/pubmedqa/pubmedqa_187/pi_initial_prompt.txt
[2025-09-25T11:49:27.684983] [PI] Calling o3 for initial analysis...
[2025-09-25T11:49:33.413060] [PI] Reasoning iteration 1
[2025-09-25T11:49:33.414824] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:49:33.416497] [PI] Function arguments: {'query': 'Cerebromediastinal tuberculosis in a child with a probable Say-Barber-Miller syndrome a causative link', 'k': 10, 'faiss_weight': 0.7, 'bm25_weight': 0.3, 'use_rrf': True}
[2025-09-25T11:49:33.419287] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_187/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-25T11:49:36.249812] [PI] Function hybrid_search executed successfully
[2025-09-25T11:49:36.252774] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_187/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-25T11:49:36.260521] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:49:47.279904] [PI] Reasoning iteration 2
[2025-09-25T11:49:47.281703] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:49:47.284085] [PI] Function arguments: {'query': '19108857 conclusion "[Cerebromediastinal tuberculosis in a child with a probable Say-Barber-Miller syndrome"', 'k': 5, 'faiss_weight': 0.5, 'bm25_weight': 0.5, 'use_rrf': True}
[2025-09-25T11:49:47.288397] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_187/pi_iteration_2_tool_call_2_hybrid_search.json
[2025-09-25T11:49:47.794250] [PI] Function hybrid_search executed successfully
[2025-09-25T11:49:47.796369] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_187/pi_iteration_2_tool_result_2_hybrid_search.json
[2025-09-25T11:49:47.811368] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:49:57.785436] [PI] Reasoning iteration 3
[2025-09-25T11:49:57.787884] [PI] No function calls found in response
[2025-09-25T11:49:57.789655] [PI] No more function calls - research complete
[2025-09-25T11:49:57.791322] Saving text to bench_final/run1/pubmedqa/pubmedqa_187/pi_final_answer.txt
[2025-09-25T11:49:57.796363] [QUERYOME] Query completed successfully
