[2025-09-25T11:20:32.727840] [QUERYOME] Starting research for query 114: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Pituitary apoplexy: do histological features influence the clinical presentation and outcome? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:20:32.809484] [PI] Starting research for query: 'Instructions: 
 Answer the question below. Please respond with the option letter (A, B, or C) first. (HINT: Each PubMedQA instance is composed of (1) a question which is either an existing research article title or derived from one, (2) a context which is the corresponding abstract without its conclusion, (3) a long answer, which is the conclusion of the abstract and, presumably, answers the research question, and (4) a yes/no/maybe answer which summarizes the conclusion.) 

Question:
Pituitary apoplexy: do histological features influence the clinical presentation and outcome? 

Options:
{'A': 'yes', 'B': 'no', 'C': 'maybe'}'
[2025-09-25T11:20:32.811624] Saving text to bench_final/run1/pubmedqa/pubmedqa_113/pi_initial_prompt.txt
[2025-09-25T11:20:32.816123] [PI] Calling o3 for initial analysis...
[2025-09-25T11:20:42.534786] [PI] Reasoning iteration 1
[2025-09-25T11:20:42.536511] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:20:42.538882] [PI] Function arguments: {'query': 'Pituitary apoplexy: do histological features influence the clinical presentation and outcome?', 'k': 5, 'faiss_weight': 0.6, 'bm25_weight': 0.4, 'use_rrf': True}
[2025-09-25T11:20:42.540098] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_113/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-25T11:20:45.654028] [PI] Function hybrid_search executed successfully
[2025-09-25T11:20:45.656476] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_113/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-25T11:20:45.686261] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:20:50.750160] [PI] Reasoning iteration 2
[2025-09-25T11:20:50.751860] [PI] Executing function call 1: hybrid_search
[2025-09-25T11:20:50.754164] [PI] Function arguments: {'query': '16776337 abstract conclusion The patients who presented with histological features of pituitary tumor infarction alone had less severe clinical features on presentation, a longer course prior to presentation, and a better outcome than those presenting with hemorrhagic infarction or frank hemorrhage.', 'k': 3, 'faiss_weight': 0.5, 'bm25_weight': 0.5, 'use_rrf': True}
[2025-09-25T11:20:50.755891] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_113/pi_iteration_2_tool_call_2_hybrid_search.json
[2025-09-25T11:20:53.198386] [PI] Function hybrid_search executed successfully
[2025-09-25T11:20:53.200411] Saving JSON to bench_final/run1/pubmedqa/pubmedqa_113/pi_iteration_2_tool_result_2_hybrid_search.json
[2025-09-25T11:20:53.215037] [PI] Continuing reasoning with 1 function responses...
[2025-09-25T11:21:00.396873] [PI] Reasoning iteration 3
[2025-09-25T11:21:00.399476] [PI] No function calls found in response
[2025-09-25T11:21:00.401042] [PI] No more function calls - research complete
[2025-09-25T11:21:00.411062] Saving text to bench_final/run1/pubmedqa/pubmedqa_113/pi_final_answer.txt
[2025-09-25T11:21:00.434255] [QUERYOME] Query completed successfully
