[2025-10-01T23:04:00.448100] [QUERYOME] Starting research for query 1121: 'Instructions:
 Answer the question below. First, respond with the single best option letter (A, B, C, or D). Then provide a concise reasoning (1–3 sentences). Use both the retrieved evidence and your own medical knowledge to choose the most accurate answer.

Question:
Which of the following inborn errors of metabolism is associated with mental retardation –a)  Alkaptonuriab)  Homocystinuriac)  Pentosuriad)  Galactosemia

Options:
A. c
B. d
C. bd
D. ac'
[2025-10-01T23:04:00.484829] [PI] Starting research for query: 'Instructions:
 Answer the question below. First, respond with the single best option letter (A, B, C, or D). Then provide a concise reasoning (1–3 sentences). Use both the retrieved evidence and your own medical knowledge to choose the most accurate answer.

Question:
Which of the following inborn errors of metabolism is associated with mental retardation –a)  Alkaptonuriab)  Homocystinuriac)  Pentosuriad)  Galactosemia

Options:
A. c
B. d
C. bd
D. ac'
[2025-10-01T23:04:00.486810] Saving text to bench_final/run1/medmcqa/medmcqa_2681/pi_initial_prompt.txt
[2025-10-01T23:04:00.489725] [PI] Calling o3 for initial analysis...
[2025-10-01T23:04:06.332524] [PI] Reasoning iteration 1
[2025-10-01T23:04:06.333990] [PI] Executing function call 1: hybrid_search
[2025-10-01T23:04:06.336391] [PI] Function arguments: {'query': 'homocystinuria intellectual disability mental retardation', 'k': 10, 'faiss_weight': 0.6, 'bm25_weight': 0.4, 'use_rrf': True}
[2025-10-01T23:04:06.337641] Saving JSON to bench_final/run1/medmcqa/medmcqa_2681/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-10-01T23:04:08.080882] [PI] Function hybrid_search executed successfully
[2025-10-01T23:04:08.082933] Saving JSON to bench_final/run1/medmcqa/medmcqa_2681/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-10-01T23:04:08.088907] [PI] Continuing reasoning with 1 function responses...
[2025-10-01T23:04:10.890993] [PI] Reasoning iteration 2
[2025-10-01T23:04:10.892598] [PI] Executing function call 1: hybrid_search
[2025-10-01T23:04:10.894233] [PI] Function arguments: {'query': 'galactosemia mental retardation intellectual disability', 'k': 10, 'faiss_weight': 0.6, 'bm25_weight': 0.4, 'use_rrf': True}
[2025-10-01T23:04:10.896197] Saving JSON to bench_final/run1/medmcqa/medmcqa_2681/pi_iteration_2_tool_call_2_hybrid_search.json
[2025-10-01T23:04:12.427046] [PI] Function hybrid_search executed successfully
[2025-10-01T23:04:12.428556] Saving JSON to bench_final/run1/medmcqa/medmcqa_2681/pi_iteration_2_tool_result_2_hybrid_search.json
[2025-10-01T23:04:12.438739] [PI] Continuing reasoning with 1 function responses...
[2025-10-01T23:04:20.082733] [PI] Reasoning iteration 3
[2025-10-01T23:04:20.084253] [PI] No function calls found in response
[2025-10-01T23:04:20.086500] [PI] No more function calls - research complete
[2025-10-01T23:04:20.087609] Saving text to bench_final/run1/medmcqa/medmcqa_2681/pi_final_answer.txt
[2025-10-01T23:04:20.105977] [QUERYOME] Query completed successfully
