[2025-09-29T15:41:02.975300] [QUERYOME] Starting research for query 122: 'Instructions: 
 Answer the question below. First, respond with the single best option letter (A, B, C, or D). Then provide a concise reasoning (1–3 sentences). Use both the retrieved evidence and your own medical knowledge to choose the most accurate answer. 

Question:
Lipoarabinomannan (LAM) assay in urine is used for screening of? 

Options:
{'A': 'Mycobacterium tuberculosis', 'B': 'Pneumocystis jirovecii', 'C': 'Histoplasm capsulatum', 'D': 'Cryptococcus neoformans'}'
[2025-09-29T15:41:03.015261] [PI] Starting research for query: 'Instructions: 
 Answer the question below. First, respond with the single best option letter (A, B, C, or D). Then provide a concise reasoning (1–3 sentences). Use both the retrieved evidence and your own medical knowledge to choose the most accurate answer. 

Question:
Lipoarabinomannan (LAM) assay in urine is used for screening of? 

Options:
{'A': 'Mycobacterium tuberculosis', 'B': 'Pneumocystis jirovecii', 'C': 'Histoplasm capsulatum', 'D': 'Cryptococcus neoformans'}'
[2025-09-29T15:41:03.020111] Saving text to bench_final/run1/medmcqa/medmcqa_121/pi_initial_prompt.txt
[2025-09-29T15:41:03.035961] [PI] Calling o3 for initial analysis...
[2025-09-29T15:41:10.056433] [PI] Reasoning iteration 1
[2025-09-29T15:41:10.058109] [PI] Executing function call 1: hybrid_search
[2025-09-29T15:41:10.060441] [PI] Function arguments: {'query': 'urine lipoarabinomannan assay screening HIV tuberculosis', 'k': 5, 'faiss_weight': 0.7, 'bm25_weight': 0.3, 'use_rrf': True}
[2025-09-29T15:41:10.062598] Saving JSON to bench_final/run1/medmcqa/medmcqa_121/pi_iteration_1_tool_call_2_hybrid_search.json
[2025-09-29T15:42:06.725015] [PI] Function hybrid_search executed successfully
[2025-09-29T15:42:06.727341] Saving JSON to bench_final/run1/medmcqa/medmcqa_121/pi_iteration_1_tool_result_2_hybrid_search.json
[2025-09-29T15:42:06.736186] [PI] Continuing reasoning with 1 function responses...
[2025-09-29T15:42:10.443512] [PI] Reasoning iteration 2
[2025-09-29T15:42:10.446378] [PI] No function calls found in response
[2025-09-29T15:42:10.447865] [PI] No more function calls - research complete
[2025-09-29T15:42:10.449074] Saving text to bench_final/run1/medmcqa/medmcqa_121/pi_final_answer.txt
[2025-09-29T15:42:10.455968] [QUERYOME] Query completed successfully
