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KEGG Organisms

Eukaryotes: 55+21+49    Bacteria: 557    Archaea: 48
1995: 2   1996: 2   1997: 8   1998: 7   1999: 6   2000: 18   2001: 28   2002: 38   2003: 46   2004: 67   2005: 90   2006: 138   2007: 172  

Eukaryotes

Category Species Com-
pleted		 Source
Animals Vertebrates Mammals Homo sapiens (human) hsa RefSeq
Pan troglodytes (chimpanzee) ptr RefSeq
Macaca mulatta (rhesus monkey) mcc RefSeq
Mus musculus (mouse) mmu RefSeq
Rattus norvegicus (rat) rno RefSeq
Canis familiaris (dog) cfa RefSeq
Bos taurus (cow) bta RefSeq
Sus scrofa (pig) ssc RefSeq
Equus caballus (horse) decb RefSeq
Monodelphis domestica (opossum) mdo RefSeq
Birds Gallus gallus (chicken) gga RefSeq
Amphibians Xenopus laevis (African clawed frog) xla RefSeq
Xenopus tropicalis (western clawed frog) xtr RefSeq
Fishes Danio rerio (zebrafish) dre RefSeq
Fugu rubripes (Japanese puffer fish) dfru Ensembl
Tetraodon nigroviridis (green spotted puffer) dtni GenBank
Oryzias latipes (Japanese medaka) dola Ensembl
Ascidians Ciona intestinalis (sea squirt) dcin JGI
Ciona savignyi (EST) ecsv dbEST
Molgula tectiformis (EST) emte dbEST
Echinoderms Strongylocentrotus purpuratus (purple sea urchin) spu RefSeq
Strongylocentrotus purpuratus (purple sea urchin) (EST) espu dbEST
Cnidarians Nematostella vectensis (sea anemone) nve RefSeq
Insects Drosophila melanogaster (fruit fly) dme RefSeq
Drosophila pseudoobscura dpo RefSeq
Anopheles gambiae (mosquito) aga RefSeq
Aedes aegypti (yellow fever mosquito) daag VectorBase
Apis mellifera (honey bee) dame Ensembl
Bombyx mori (silkmoth) dbmo Beijing
Nematodes Caenorhabditis elegans (nematode) cel RefSeq
Caenorhabditis briggsae dcbr Ensembl
Flatworms Schistosoma japonicum (fluke) (EST) esja dbEST
Plants Dicotyledons mustard family Arabidopsis thaliana (thale cress) ath RefSeq
Arabidopsis thaliana (thale cress) (EST) eath dbEST
Brassica napus (rape) (EST) ebna dbEST
rue family Citrus sinensis (Valencia orange) (EST) ecsi dbEST
mallow family Gossypium arboreum (cotton) (EST) egar dbEST
Gossypium raimondii (EST) egra dbEST
Gossypium hirsutu (upland cotton) (EST) eghi dbEST
pea family Glycine max (soybean) (EST) egma dbEST
Lotus japonicus (lotus) (EST) elja dbEST
Medicago truncatula (barrel medic) (EST) emtr dbEST
willow family Populus trichocarpa (black cottonwood) dpop JGI
Populus trichocarpa (black cottonwood) (EST) epop dbEST
Populus tremula (European aspen) (EST) eptp dbEST
daisy family Helianthus annuus (sunflower) (EST) ehan dbEST
Lactuca sativa (lettuce) (EST) elst dbEST
Lactuca perennis (blue lettuce) (EST) elpe dbEST
Lactuca saligna (willowleaf lettuce) (EST) elsi dbEST
Lactuca virosa (wild lettuce) (EST) elvi dbEST
Zinnia elegans (zinnia) (EST) ezel dbEST
nightshade family Solanum lycopersicum (tomato) (EST) esly dbEST
Solanum tuberosum (potato) (EST) estu dbEST
Capsicum annuum (chile pepper) (EST) ecan dbEST
Nicotiana tabacum (tabacco) (EST) enta dbEST
Nicotiana benthamiana (EST) enbe dbEST
grape family Vitis vinifera (wine grape) dvvi Genoscope
Vitis vinifera (wine grape) (EST) evvi dbEST
goosefoot family Beta vulgaris (beet) (EST) ebvl dbEST
supurge family Euphorbia esula (spurge) (EST) eees dbEST
Manihot esculent (tapioca) (EST) emec dbEST
morning-glory family Ipomoea nil (Japanese morning glory) (EST) eini dbEST
rose family Prunus persica (peach) (EST) epps dbEST
Monocotyledons grass family Oryza sativa japonica (Japanese rice) osa RefSeq
Oryza sativa (rice) (EST) eosa dbEST
Oryza sativa japonica (Japanese rice) (EST) eosj dbEST
Oryza sativa indica (Indian rice) (EST) eosi dbEST
Hordeum vulgare (barley) (EST) ehvu dbEST
Triticum aestivum (wheat) (EST) etae dbEST
Zea mays (maize) (EST) ezma dbEST
Saccharum officinarum (sugarcane) (EST) esof dbEST
Sorghum bicolor (sorghum) (EST) esbi dbEST
Sorghum propinquum (EST) espp dbEST
Festuca arundinacea (tall fescue) (EST) efar dbEST
lily family Allium cepa (onion) (EST) eacp dbEST
Other seed plants pine family Pinus taeda (loblolly pine) (EST) epta dbEST
Pinus pinaster (maritime pine) (EST) eppi dbEST
Picea glauca (white spruce) (EST) epgl dbEST
Picea sitchensis (sitka spruce) (EST) epsi dbEST
Mosses Physcomitrella patens (EST) eppa dbEST
Physcomitrella patens subsp. patens (EST) eppp dbEST
Red algae Cyanidioschyzon merolae cme U Tokyo
Green algae Ostreococcus lucimarinus olu RefSeq
Ostreococcus tauri dota Ghent
Fungi Ascomycetes Saccharomycetes Saccharomyces cerevisiae sce RefSeq
Saccharomyces paradoxus dspd SGD
Saccharomyces mikatae dsmi SGD
Saccharomyces bayanus dsba SGD
Ashbya gossypii (Eremothecium gossypii) ago RefSeq
Kluyveromyces lactis kla RefSeq
Kluyveromyces waltii dkwa Nature
Debaryomyces hansenii dha RefSeq
Pichia stipitis pic RefSeq
Candida albicans cal RefSeq
Candida glabrata cgr RefSeq
Yarrowia lipolytica yli RefSeq
Schizosaccharomycetes Schizosaccharomyces pombe spo RefSeq
Sordariomycete Neurospora crassa ncr RefSeq
Magnaporthe grisea mgr RefSeq
Fusarium graminearum fgr RefSeq
Eurotiales Aspergillus nidulans ani GenBank
Aspergillus fumigatus afm RefSeq
Aspergillus oryzae aor GenBank
Aspergillus niger ang RefSeq
Basidiomycetes Cryptococcus neoformans JEC21 cne RefSeq
Cryptococcus neoformans B-3501A dcnb GenBank
Phanerochaete chrysosporium dpch JGI
Ustilago maydis uma RefSeq
Microsporidian Encephalitozoon cuniculi ecu RefSeq
Protists Cellular slime mold Dictyostelium discoideum ddi RefSeq
Alveolates Apicomplexa Plasmodium falciparum pfa RefSeq
Plasmodium yoelii pyo RefSeq
Plasmodium knowlesi dpkn Sanger
Cryptosporidium parvum cpv RefSeq
Cryptosporidium hominis cho RefSeq
Theileria annulata tan RefSeq
Theileria parva tpv RefSeq
Ciliates Tetrahymena thermophila tet RefSeq
Paramecium tetraurelia dptm Genoscope
Euglenozoa Trypanosoma brucei tbr RefSeq
Trypanosoma cruzi tcr RefSeq
Leishmania major lma Sanger
Entamoeba Entamoeba histolytica ehi RefSeq
Parabasalids Trichomonas vaginalis tva RefSeq
Diatoms Thalassiosira pseudonana dtps JGI

Prokaryotes

Category Species Com-
pleted		 Source
Bacteria Proteobacteria Gamma/enterobacteria Escherichia coli K-12 MG1655 eco RefSeq
Escherichia coli K-12 W3110 ecj RefSeq
Escherichia coli O157 EDL933 (EHEC) ece RefSeq
Escherichia coli O157 Sakai (EHEC) ecs RefSeq
Escherichia coli CFT073 (UPEC) ecc RefSeq
Escherichia coli UTI89 (UPEC) eci RefSeq
Escherichia coli 536 (UPEC) ecp RefSeq
Escherichia coli APEC O1 ecv RefSeq
Escherichia coli E24377A ecw RefSeq
Escherichia coli HS ecx RefSeq
Salmonella enterica serovar Typhi CT18 sty RefSeq
Salmonella enterica serovar Typhi Ty2 stt RefSeq
Salmonella enterica serovar Paratyphi A spt RefSeq
Salmonella enterica serovar Choleraesuis sec RefSeq
Salmonella typhimurium LT2 stm Refseq
Yersinia pestis CO92 ype RefSeq
Yersinia pestis KIM ypk RefSeq
Yersinia pestis Mediaevails ypm RefSeq
Yersinia pestis Antiqua ypa RefSeq
Yersinia pestis Nepal516 ypn RefSeq
Yersinia pestis Pestoides ypp RefSeq
Yersinia pseudotuberculosis IP32953 yps RefSeq
Yersinia pseudotuberculosis IP31758 ypi RefSeq
Yersinia enterocolitica yen RefSeq
Shigella flexneri 301 (serotype 2a) sfl RefSeq
Shigella flexneri 2457T (serotype 2a) sfx RefSeq
Shigella flexneri 8401 (serotype 5b) sfv RefSeq
Shigella sonnei ssn RefSeq
Shigella boydii sbo RefSeq
Shigella dysenteriae sdy RefSeq
Erwinia carotovora eca RefSeq
Photorhabdus luminescens plu RefSeq
Buchnera aphidicola APS buc RefSeq
Buchnera aphidicola Sg bas RefSeq
Buchnera aphidicola Bp bab RefSeq
Buchnera aphidicola Cc bcc RefSeq
Wigglesworthia glossinidia wbr RefSeq
Sodalis glossinidius sgl RefSeq
Enterobacter sp. 638 ent RefSeq
Enterobacter sakazakii esa RefSeq
Klebsiella pneumoniae kpn RefSeq
Citrobacter koseri ATCC BAA-895 cko RefSeq
Serratia proteamaculans spe RefSeq
Candidatus Blochmannia floridanus bfl RefSeq
Candidatus Blochmannia pennsylvanicus bpn RefSeq
Gamma/others Haemophilus influenzae (serotype d) hin RefSeq
Haemophilus influenzae 86-028NP (nontypeable) hit RefSeq
Haemophilus influenzae PittEE hip RefSeq
Haemophilus influenzae PittGG hiq RefSeq
Haemophilus ducreyi hdu RefSeq
Haemophilus somnus hso RefSeq
Pasteurella multocida pmu GenBank
Mannheimia succiniciproducens msu RefSeq
Actinobacillus pleuropneumoniae apl RefSeq
Actinobacillus succinogenes asu RefSeq
Xylella fastidiosa 9a5c xfa RefSeq
Xylella fastidiosa Temecula1 xft RefSeq
Xanthomonas campestris pv. campestris ATCC 33913 xcc RefSeq
Xanthomonas campestris pv. campestris 8004 xcb RefSeq
Xanthomonas campestris pv. vesicatoria xcv RefSeq
Xanthomonas axonopodis xac RefSeq
Xanthomonas oryzae KACC10331 xoo RefSeq
Xanthomonas oryzae MAFF311018 xom RefSeq
Vibrio cholerae O1 vch RefSeq
Vibrio cholerae O395 vco RefSeq
Vibrio vulnificus CMCP6 vvu RefSeq
Vibrio vulnificus YJ016 vvy RefSeq
Vibrio parahaemolyticus vpa RefSeq
Vibrio fischeri vfi RefSeq
Vibrio harveyi vha RefSeq
Photobacterium profundum ppr RefSeq
Pseudomonas aeruginosa PAO1 pae RefSeq
Pseudomonas aeruginosa UCBPP-PA14 pau RefSeq
Pseudomonas aeruginosa PA7 pap RefSeq
Pseudomonas putida KT2440 ppu RefSeq
Pseudomonas putida F1 ppf RefSeq
Pseudomonas syringae pv. tomato DC3000 pst RefSeq
Pseudomonas syringae pv. syringae B728a psb RefSeq
Pseudomonas syringae pv. phaseolicola 1448A psp RefSeq
Pseudomonas fluorescens Pf-5 pfl RefSeq
Pseudomonas fluorescens PfO-1 pfo RefSeq
Pseudomonas entomophila pen RefSeq
Pseudomonas mendocina pmy RefSeq
Pseudomonas stutzeri psa RefSeq
Psychrobacter arcticum par RefSeq
Psychrobacter cryohalolentis pcr RefSeq
Psychrobacter sp. PRwf-1 prw RefSeq
Acinetobacter sp. ADP1 aci RefSeq
Acinetobacter baumannii acb RefSeq
Shewanella oneidensis son RefSeq
Shewanella denitrificans sdn RefSeq
Shewanella frigidimarina sfr RefSeq
Shewanella amazonensis saz RefSeq
Shewanella baltica OS155 sbl RefSeq
Shewanella baltica OS185 sbm RefSeq
Shewanella baltica OS195 sbn RefSeq
Shewanella loihica slo RefSeq
Shewanella putrefaciens spc RefSeq
Shewanella sediminis sse RefSeq
Shewanella pealeana spl RefSeq
Shewanella sp. MR-4 she RefSeq
Shewanella sp. MR-7 shm RefSeq
Shewanella sp. ANA-3 shn RefSeq
Shewanella sp. W3-18-1 shw RefSeq
Idiomarina loihiensis ilo RefSeq
Colwellia psychrerythraea cps RefSeq
Pseudoalteromonas haloplanktis pha RefSeq
Pseudoalteromonas atlantica pat RefSeq
Saccharophagus degradans sde RefSeq
Psychromonas ingrahamii pin RefSeq
Marinobacter aquaeolei maq RefSeq
Coxiella burnetii RSA 493 cbu RefSeq
Coxiella burnetii Dugway 7E9-12 cbd RefSeq
Legionella pneumophila Philadelphia 1 lpn RefSeq
Legionella pneumophila Lens lpf RefSeq
Legionella pneumophila Paris lpp RefSeq
Legionella pneumophila Corby lpc RefSeq
Methylococcus capsulatus mca RefSeq
Francisella tularensis subsp. tularensis SCHU S4 ftu RefSeq
Francisella tularensis subsp. tularensis FSC 198 ftf RefSeq
Francisella tularensis subsp. tularensis WY96-3418 ftw RefSeq
Francisella tularensis subsp. holarctica LVS ftl RefSeq
Francisella tularensis subsp. holarctica OSU18 fth RefSeq
Francisella tularensis subsp. holarctica FTA fta RefSeq
Francisella tularensis subsp. novicida U112 ftn RefSeq
Thiomicrospira crunogena tcx RefSeq
Nitrosococcus oceani noc RefSeq
Alkalilimnicola ehrlichei aeh RefSeq
Halorhodospira halophila hha RefSeq
Hahella chejuensis hch RefSeq
Chromohalobacter salexigens csa RefSeq
Alcanivorax borkumensis abo RefSeq
Marinomonas sp. MWYL1 mmw RefSeq
Aeromonas hydrophila aha RefSeq
Aeromonas salmonicida asa RefSeq
Dichelobacter nodosus dno RefSeq
Baumannia cicadellinicola bci RefSeq
Candidatus Carsonella ruddii crp RefSeq
Candidatus Ruthia magnifica rma RefSeq
Candidatus Vesicomyosocius okutanii vok RefSeq
Beta Neisseria meningitidis MC58 (serogroup B) nme RefSeq
Neisseria meningitidis Z2491 (serogroup A) nma RefSeq
Neisseria meningitidis FAM18 nmc RefSeq
Neisseria gonorrhoeae ngo RefSeq
Chromobacterium violaceum cvi RefSeq
Ralstonia solanacearum rso RefSeq
Ralstonia eutropha JMP134 reu RefSeq
Ralstonia eutropha H16 reh RefSeq
Ralstonia metallidurans rme RefSeq
Burkholderia mallei ATCC 23344 bma RefSeq
Burkholderia mallei SAVP1 bmv RefSeq
Burkholderia mallei NCTC 10229 bml RefSeq
Burkholderia mallei NCTC 10247 bmn RefSeq
Burkholderia xenovorans bxe RefSeq
Burkholderia vietnamiensis bvi RefSeq
Burkholderia sp. 383 bur RefSeq
Burkholderia cenocepacia AU1054 bcn RefSeq
Burkholderia cenocepacia HI2424 bch RefSeq
Burkholderia cepacia bam RefSeq
Burkholderia pseudomallei K96243 bps RefSeq
Burkholderia pseudomallei 1710b bpm RefSeq
Burkholderia pseudomallei 1106a bpl RefSeq
Burkholderia pseudomallei 668 bpd RefSeq
Burkholderia thailandensis bte RefSeq
Polynucleobacter sp. QLW-P1DMWA-1 pnu RefSeq
Bordetella pertussis bpe RefSeq
Bordetella parapertussis bpa RefSeq
Bordetella bronchiseptica bbr RefSeq
Rhodoferax ferrireducens rfr RefSeq
Polaromonas sp. JS666 pol RefSeq
Polaromonas naphthalenivorans pna RefSeq
Acidovorax avenae aav RefSeq
Acidovorax sp. JS42 ajs RefSeq
Verminephrobacter eiseniae vei RefSeq
Delftia acidovorans dac RefSeq
Methylibium petroleiphilum mpt RefSeq
Herminiimonas arsenicoxydans har RefSeq
Minibacterium massiliensis mms RefSeq
Nitrosomonas europaea neu RefSeq
Nitrosomonas eutropha net RefSeq
Nitrosospira multiformis nmu RefSeq
Azoarcus sp. EbN1 eba RefSeq
Azoarcus sp. BH72 azo RefSeq
Dechloromonas aromatica dar RefSeq
Thiobacillus denitrificans tbd RefSeq
Methylobacillus flagellatus mfa RefSeq
Epsilon Helicobacter pylori 26695 hpy RefSeq
Helicobacter pylori J99 hpj RefSeq
Helicobacter pylori HPAG1 hpa RefSeq
Helicobacter hepaticus hhe RefSeq
Helicobacter acinonychis hac RefSeq
Wolinella succinogenes wsu RefSeq
Thiomicrospira denitrificans tdn RefSeq
Campylobacter jejuni NCTC11168 cje RefSeq
Campylobacter jejuni RM1221 cjr RefSeq
Campylobacter jejuni 81-176 cjj RefSeq
Campylobacter jejuni 81116 cju RefSeq
Campylobacter jejuni subsp. doylei 269.97 cjd RefSeq
Campylobacter fetus cff RefSeq
Campylobacter curvus ccv RefSeq
Campylobacter hominis ATCC BAA-381 cha RefSeq
Campylobacter concisus 13826 cco RefSeq
Arcobacter butzleri abu RefSeq
Nitratiruptor sp. SB155-2 nis RefSeq
Sulfurovum sp. NBC37-1 sun RefSeq
Delta Geobacter sulfurreducens gsu RefSeq
Geobacter metallireducens gme RefSeq
Geobacter uraniumreducens gur RefSeq
Pelobacter carbinolicus pca RefSeq
Pelobacter propionicus ppd RefSeq
Desulfovibrio vulgaris Hildenborough dvu RefSeq
Desulfovibrio vulgaris DP4 dvl RefSeq
Desulfovibrio desulfuricans dde RefSeq
Lawsonia intracellularis lip RefSeq
Bdellovibrio bacteriovorus bba RefSeq
Desulfotalea psychrophila dps RefSeq
Candidatus Desulfococcus oleovorans dol RefSeq
Anaeromyxobacter dehalogenans ade RefSeq
Anaeromyxobacter sp. Fw109-5 afw RefSeq
Myxococcus xanthus mxa RefSeq
Syntrophus aciditrophicus sat RefSeq
Syntrophobacter fumaroxidans sfu RefSeq
Alpha/rickettsias Rickettsia prowazekii rpr RefSeq
Rickettsia typhi rty RefSeq
Rickettsia conorii rco RefSeq
Rickettsia felis rfe RefSeq
Rickettsia bellii rbe RefSeq
Rickettsia akari Hartford rak RefSeq
Rickettsia bellii OSU 85-389 rbo RefSeq
Rickettsia canadensis McKiel rcm RefSeq
Rickettsia rickettsii rri RefSeq
Rickettsia massiliae rms RefSeq
Orientia tsutsugamushi ots RefSeq
Wolbachia wMel wol RefSeq
Wolbachia wBm wbm RefSeq
Anaplasma marginale ama RefSeq
Anaplasma phagocytophilum aph RefSeq
Ehrlichia ruminantium Welgevonden (South Africa) eru RefSeq
Ehrlichia ruminantium Welgevonden (France) erw RefSeq
Ehrlichia ruminantium Gardel erg RefSeq
Ehrlichia canis ecn RefSeq
Ehrlichia chaffeensis ech RefSeq
Neorickettsia sennetsu nse RefSeq
Candidatus Pelagibacter ubique pub RefSeq
Alpha/rhizobacteria Mesorhizobium loti mlo RefSeq
Mesorhizobium sp. BNC1 mes RefSeq
Parvibaculum lavamentivorans pla RefSeq
Sinorhizobium meliloti sme RefSeq
Sinorhizobium medicae smd RefSeq
Agrobacterium tumefaciens C58 (UWash/Dupont) atu RefSeq
Agrobacterium tumefaciens C58 (Cereon) atc RefSeq
Rhizobium etli ret RefSeq
Rhizobium leguminosarum rle RefSeq
Brucella melitensis bme RefSeq
Brucella melitensis biovar Abortus bmf RefSeq
Brucella suis bms RefSeq
Brucella abortus bmb RefSeq
Brucella ovis bov RefSeq
Ochrobactrum anthropi oan RefSeq
Bradyrhizobium japonicum bja RefSeq
Bradyrhizobium sp. ORS278 bra RefSeq
Bradyrhizobium sp. BTAi1 bbt RefSeq
Rhodopseudomonas palustris CGA009 rpa RefSeq
Rhodopseudomonas palustris HaA2 rpb RefSeq
Rhodopseudomonas palustris BisB18 rpc RefSeq
Rhodopseudomonas palustris BisB5 rpd RefSeq
Rhodopseudomonas palustris BisA53 rpe RefSeq
Nitrobacter winogradskyi nwi RefSeq
Nitrobacter hamburgensis nha RefSeq
Bartonella henselae bhe RefSeq
Bartonella quintana bqu RefSeq
Bartonella bacilliformis bbk RefSeq
Xanthobacter autotrophicus xau RefSeq
Azorhizobium caulinodans azc RefSeq
Alpha/others Caulobacter crescentus ccr RefSeq
Silicibacter pomeroyi sil RefSeq
Silicibacter sp. TM1040 sit RefSeq
Rhodobacter sphaeroides 2.4.1 rsp RefSeq
Rhodobacter sphaeroides ATCC 17029 rsh RefSeq
Rhodobacter sphaeroides ATCC 17025 rsq RefSeq
Jannaschia sp. CCS1 jan RefSeq
Roseobacter denitrificans rde RefSeq
Paracoccus denitrificans pde RefSeq
Dinoroseobacter shibae dsh RefSeq
Maricaulis maris mmr RefSeq
Hyphomonas neptunium hne RefSeq
Zymomonas mobilis zmo RefSeq
Novosphingobium aromaticivorans nar RefSeq
Sphingopyxis alaskensis sal RefSeq
Sphingomonas wittichii swi RefSeq
Erythrobacter litoralis eli RefSeq
Gluconobacter oxydans gox RefSeq
Granulobacter bethesdensis gbe RefSeq
Acidiphilium cryptum JF-5 acr RefSeq
Rhodospirillum rubrum rru RefSeq
Magnetospirillum magneticum mag RefSeq
Magnetococcus Magnetococcus sp. MC-1 mgm RefSeq
Acidobacteria Acidobacteria bacterium aba RefSeq
Solibacter usitatus sus RefSeq
Firmicutes Bacillales Bacillus subtilis bsu SubtiList
Bacillus halodurans bha RefSeq
Bacillus anthracis Ames ban RefSeq
Bacillus anthracis Ames 0581 bar RefSeq
Bacillus anthracis A2012 baa GenBank
Bacillus anthracis Sterne bat RefSeq
Bacillus cereus ATCC 14579 bce RefSeq
Bacillus cereus ATCC 10987 bca RefSeq
Bacillus cereus ZK bcz RefSeq
Bacillus cereus subsp. cytotoxis NVH 391-98 bcy RefSeq
Bacillus thuringiensis 97-27 btk RefSeq
Bacillus thuringiensis Al Hakam btl RefSeq
Bacillus licheniformis ATCC 14580 bli RefSeq
Bacillus licheniformis DSM13 bld RefSeq
Bacillus clausii bcl RefSeq
Bacillus amyloliquefaciens bay RefSeq
Bacillus pumilus bpu RefSeq
Oceanobacillus iheyensis oih RefSeq
Geobacillus kaustophilus gka RefSeq
Geobacillus thermodenitrificans gtn RefSeq
Staphylococcus aureus N315 sau RefSeq
Staphylococcus aureus Mu50 sav RefSeq
Staphylococcus aureus Mu3 saw RefSeq
Staphylococcus aureus MW2 sam RefSeq
Staphylococcus aureus MRSA252 sar RefSeq
Staphylococcus aureus MSSA476 sas RefSeq
Staphylococcus aureus COL sac RefSeq
Staphylococcus aureus RF122 sab RefSeq
Staphylococcus aureus USA300 saa RefSeq
Staphylococcus aureus NCTC8325 sao RefSeq
Staphylococcus aureus JH9 saj RefSeq
Staphylococcus aureus JH1 sah RefSeq
Staphylococcus aureus Newman sae RefSeq
Staphylococcus epidermidis ATCC 12228 sep RefSeq
Staphylococcus epidermidis RP62A ser RefSeq
Staphylococcus haemolyticus sha RefSeq
Staphylococcus saprophyticus ssp RefSeq
Listeria monocytogenes EGD-e lmo RefSeq
Listeria monocytogenes F2365 lmf RefSeq
Listeria innocua lin RefSeq
Listeria welshimeri SLCC5334 lwe RefSeq
Lactobacillales Lactococcus lactis subsp. lactis IL1403 lla RefSeq
Lactococcus lactis subsp. cremoris SK11 llc RefSeq
Lactococcus lactis subsp. cremoris MG1363 llm RefSeq
Streptococcus pyogenes SF370 (serotype M1) spy RefSeq
Streptococcus pyogenes MGAS5005 (serotype M1) spz RefSeq
Streptococcus pyogenes MGAS8232 (serotype M18) spm RefSeq
Streptococcus pyogenes MGAS315 (serotype M3) spg RefSeq
Streptococcus pyogenes SSI-1 (serotype M3) sps RefSeq
Streptococcus pyogenes MGAS10270 (serotype M3) sph RefSeq
Streptococcus pyogenes MGAS10750 (serotype M3) spi RefSeq
Streptococcus pyogenes MGAS2096 (serotype M3) spj RefSeq
Streptococcus pyogenes MGAS9429 (serotype M3) spk RefSeq
Streptococcus pyogenes Manfredo (serotype M5) spf RefSeq
Streptococcus pyogenes MGAS10394 (serotype M6) spa RefSeq
Streptococcus pyogenes MGAS6180 (serotype M28) spb RefSeq
Streptococcus pneumoniae TIGR4 spn RefSeq
Streptococcus pneumoniae R6 spr RefSeq
Streptococcus pneumoniae D39 spd RefSeq
Streptococcus agalactiae 2603 (serotype V) sag RefSeq
Streptococcus agalactiae NEM316 (serotype III) san RefSeq
Streptococcus agalactiae A909 (serotype Ia) sak RefSeq
Streptococcus mutans smu RefSeq
Streptococcus thermophilus CNRZ1066 stc RefSeq
Streptococcus thermophilus LMG18311 stl RefSeq
Streptococcus thermophilus LMD-9 ste RefSeq
Streptococcus sanguinis ssa RefSeq
Streptococcus suis 05ZYH33 ssu RefSeq
Streptococcus suis 98HAH33 ssv RefSeq
Streptococcus gordonii sgo RefSeq
Lactobacillus plantarum lpl RefSeq
Lactobacillus johnsonii ljo RefSeq
Lactobacillus acidophilus lac RefSeq
Lactobacillus sakei lsa RefSeq
Lactobacillus salivarius lsl RefSeq
Lactobacillus delbrueckii ATCC 11842 ldb RefSeq
Lactobacillus delbrueckii ATCC BAA-365 lbu RefSeq
Lactobacillus brevis lbr RefSeq
Lactobacillus casei lca RefSeq
Lactobacillus gasseri lga RefSeq
Lactobacillus reuteri lre RefSeq
Pediococcus pentosaceus ppe RefSeq
Enterococcus faecalis efa RefSeq
Oenococcus oeni ooe RefSeq
Leuconostoc mesenteroides lme RefSeq
Symbiobacterium thermophilum sth RefSeq
Clostridia Clostridium acetobutylicum cac RefSeq
Clostridium perfringens 13 cpe RefSeq
Clostridium perfringens ATCC 13124 cpf RefSeq
Clostridium perfringens SM101 cpr RefSeq
Clostridium tetani E88 ctc RefSeq
Clostridium novyi cno RefSeq
Clostridium thermocellum cth RefSeq
Clostridium difficile cdf RefSeq
Clostridium botulinum A cbo RefSeq
Clostridium botulinum A ATCC 19397 cba RefSeq
Clostridium botulinum A Hall cbh RefSeq
Clostridium botulinum F cbf RefSeq
Clostridium beijerinckii cbe RefSeq
Clostridium kluyveri ckl RefSeq
Clostridium phytofermentans cpy RefSeq
Alkaliphilus metalliredigens amt RefSeq
Alkaliphilus oremlandii aoe RefSeq
Carboxydothermus hydrogenoformans chy RefSeq
Desulfitobacterium hafniense dsy RefSeq
Desulfotomaculum reducens drm RefSeq
Pelotomaculum thermopropionicum pth RefSeq
Syntrophomonas wolfei swo RefSeq
Caldicellulosiruptor saccharolyticus csc RefSeq
Thermoanaerobacter tengcongensis tte RefSeq
Moorella thermoacetica mta RefSeq
Mollicutes Mycoplasma genitalium mge RefSeq
Mycoplasma pneumoniae mpn RefSeq
Mycoplasma pulmonis mpu RefSeq
Mycoplasma penetrans mpe RefSeq
Mycoplasma gallisepticum mga RefSeq
Mycoplasma mycoides mmy RefSeq
Mycoplasma mobile mmo RefSeq
Mycoplasma hyopneumoniae 232 mhy RefSeq
Mycoplasma hyopneumoniae J mhj RefSeq
Mycoplasma hyopneumoniae 7448 mhp RefSeq
Mycoplasma synoviae msy RefSeq
Mycoplasma capricolum mcp RefSeq
Mycoplasma agalactiae maa RefSeq
Ureaplasma urealyticum uur RefSeq
Phytoplasma OY poy RefSeq
Phytoplasma AYWB ayw RefSeq
Mesoplasma florum mfl RefSeq
Actinobacteria Mycobacterium tuberculosis H37Rv mtu RefSeq
Mycobacterium tuberculosis CDC1551 mtc RefSeq
Mycobacterium tuberculosis H37Ra mra RefSeq
Mycobacterium tuberculosis F11 mtf RefSeq
Mycobacterium bovis AF2122/97 mbo RefSeq
Mycobacterium bovis BCG Pasteur 1173P2 mbb RefSeq
Mycobacterium leprae mle RefSeq
Mycobacterium avium paratuberculosis mpa RefSeq
Mycobacterium avium 104 mav RefSeq
Mycobacterium smegmatis msm RefSeq
Mycobacterium ulcerans mul RefSeq
Mycobacterium vanbaalenii mva RefSeq
Mycobacterium gilvum mgi RefSeq
Mycobacterium sp. MCS mmc RefSeq
Mycobacterium sp. KMS mkm RefSeq
Mycobacterium sp. JLS mjl RefSeq
Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) cgl RefSeq
Corynebacterium glutamicum ATCC 13032 (Bielefeld) cgb RefSeq
Corynebacterium glutamicum R cgt RefSeq
Corynebacterium efficiens cef RefSeq
Corynebacterium diphtheriae cdi RefSeq
Corynebacterium jeikeium cjk RefSeq
Nocardia farcinica nfa RefSeq
Rhodococcus sp. RHA1 rha RefSeq
Streptomyces coelicolor sco RefSeq
Streptomyces avermitilis sma RefSeq
Tropheryma whipplei Twist twh RefSeq
Tropheryma whipplei TW08/27 tws RefSeq
Leifsonia xyli xyli CTCB07 lxx RefSeq
Clavibacter michiganensis cmi RefSeq
Arthrobacter sp. FB24 art RefSeq
Arthrobacter aurescens aau RefSeq
Propionibacterium acnes pac RefSeq
Nocardioides sp. JS614 nca RefSeq
Thermobifida fusca tfu RefSeq
Frankia sp. CcI3 fra RefSeq
Frankia sp. EAN1pec fre RefSeq
Frankia alni fal RefSeq
Acidothermus cellulolyticus ace RefSeq
Kineococcus radiotolerans kra RefSeq
Saccharopolyspora erythraea sen RefSeq
Salinispora tropica stp RefSeq
Salinispora arenicola saq RefSeq
Bifidobacterium longum blo RefSeq
Bifidobacterium adolescentis bad RefSeq
Rubrobacter xylanophilus rxy RefSeq
Fusobacteria Fusobacterium nucleatum fnu RefSeq
Planctomyces Rhodopirellula baltica rba RefSeq
Chlamydia Chlamydia trachomatis serovar D ctr RefSeq
Chlamydia trachomatis serovar A cta RefSeq
Chlamydia muridarum cmu RefSeq
Chlamydophila pneumoniae CWL029 cpn RefSeq
Chlamydophila pneumoniae AR39 cpa RefSeq
Chlamydophila pneumoniae J138 cpj RefSeq
Chlamydophila pneumoniae TW183 cpt RefSeq
Chlamydophila caviae cca RefSeq
Chlamydophila abortus cab RefSeq
Chlamydophila felis cfe RefSeq
Candidatus Protochlamydia amoebophila pcu RefSeq
Spirochete Borrelia burgdorferi bbu RefSeq
Borrelia garinii bga RefSeq
Borrelia afzelii baf RefSeq
Treponema pallidum tpa RefSeq
Treponema denticola tde RefSeq
Leptospira interrogans serovar lai lil RefSeq
Leptospira interrogans serovar Copenhageni lic RefSeq
Leptospira borgpetersenii JB197 lbj RefSeq
Leptospira borgpetersenii L550 lbl RefSeq
Cyanobacteria Synechocystis sp. PCC6803 syn CyanoBase
Synechococcus sp. WH8102 syw RefSeq
Synechococcus elongatus PCC6301 syc RefSeq
Synechococcus elongatus PCC7942 syf RefSeq
Synechococcus sp. CC9605 syd RefSeq
Synechococcus sp. CC9902 sye RefSeq
Synechococcus sp. CC9311 syg RefSeq
Synechococcus sp. RCC307 syr RefSeq
Synechococcus sp. WH7803 syx RefSeq
Cyanobacteria Yellowstone A-Prime cya RefSeq
Cyanobacteria Yellowstone B-Prime cyb RefSeq
Thermosynechococcus elongatus tel CyanoBase
Gloeobacter violaceus gvi CyanoBase
Anabaena sp. PCC7120 ana CyanoBase
Anabaena variabilis ava RefSeq
Prochlorococcus marinus SS120 pma RefSeq
Prochlorococcus marinus MED4 pmm RefSeq
Prochlorococcus marinus MIT9313 pmt RefSeq
Prochlorococcus marinus NATL2A pmn RefSeq
Prochlorococcus marinus MIT9312 pmi RefSeq
Prochlorococcus marinus AS9601 pmb RefSeq
Prochlorococcus marinus MIT 9515 pmc RefSeq
Prochlorococcus marinus MIT 9303 pmf RefSeq
Prochlorococcus marinus MIT 9301 pmg RefSeq
Prochlorococcus marinus MIT 9215 pmh RefSeq
Prochlorococcus marinus MIT 9211 pmj RefSeq
Prochlorococcus marinus NATL1A pme RefSeq
Trichodesmium erythraeum ter RefSeq
Acaryochloris marina amr RefSeq
Bacteroides Bacteroides thetaiotaomicron bth RefSeq
Bacteroides fragilis YCH46 bfr RefSeq
Bacteroides fragilis NCTC9343 bfs RefSeq
Bacteroides vulgatus bvu RefSeq
Porphyromonas gingivalis pgi RefSeq
Parabacteroides distasonis pdi RefSeq
Salinibacter ruber sru RefSeq
Cytophaga hutchinsonii chu RefSeq
Gramella forsetii gfo RefSeq
Flavobacterium johnsoniae fjo RefSeq
Flavobacterium psychrophilum fps RefSeq
Green sulfur bacteria Chlorobaculum tepidum cte RefSeq
Chlorobium chlorochromatii cch RefSeq
Chlorobium phaeobacteroides cph RefSeq
Prosthecochloris vibrioformis pvi RefSeq
Pelodictyon luteolum plt RefSeq
Green nonsulfur bacteria Dehalococcoides ethenogenes det RefSeq
Dehalococcoides sp. CBDB1 deh RefSeq
Dehalococcoides sp. BAV1 deb RefSeq
Roseiflexus sp. RS-1 rrs RefSeq
Roseiflexus castenholzii DSM13941 rca RefSeq
Herpetosiphon aurantiacus hau RefSeq
Deinococcus-Thermus Deinococcus radiodurans dra RefSeq
Deinococcus geothermalis dge RefSeq
Thermus thermophilus HB27 tth RefSeq
Thermus thermophilus HB8 ttj RefSeq
Hyperthermophilic bacteria Aquifex aeolicus aae RefSeq
Thermotoga maritima tma RefSeq
Thermotoga petrophila tpt RefSeq
Thermotoga lettingae tle RefSeq
Thermosipho melanesiensis tme RefSeq
Fervidobacterium nodosum fno RefSeq
Petrotoga mobilis pmo RefSeq
Archaea Euryarchaeota Methanococcus jannaschii mja RefSeq
Methanococcus maripaludis S2 mmp RefSeq
Methanococcus maripaludis C5 mmq RefSeq
Methanococcus maripaludis C6 mmx RefSeq
Methanococcus maripaludis C7 mmz RefSeq
Methanococcus aeolicus mae RefSeq
Methanococcus vannielii mvn RefSeq
Methanosarcina acetivorans mac RefSeq
Methanosarcina barkeri mba RefSeq
Methanosarcina mazei mma RefSeq
Methanococcoides burtonii mbu RefSeq
Methanosaeta thermophila mtp RefSeq
Methanospirillum hungatei mhu RefSeq
Methanocorpusculum labreanum mla RefSeq
Methanoculleus marisnigri mem RefSeq
Candidatus Methanoregula boonei mbn RefSeq
Methanobacterium thermoautotrophicum mth RefSeq
Methanosphaera stadtmanae mst RefSeq
Methanobrevibacter smithii ATCC 35061 msi RefSeq
Methanopyrus kandleri mka RefSeq
Archaeoglobus fulgidus afu RefSeq
Halobacterium sp. NRC-1 hal RefSeq
Haloarcula marismortui hma RefSeq
Haloquadratum walsbyi hwa RefSeq
Natronomonas pharaonis nph RefSeq
Thermoplasma acidophilum tac RefSeq
Thermoplasma volcanium tvo RefSeq
Picrophilus torridus pto RefSeq
Pyrococcus horikoshii pho RefSeq
Pyrococcus abyssi pab RefSeq
Pyrococcus furiosus pfu RefSeq
Thermococcus kodakaraensis tko RefSeq
Uncultured methanogenic archaeon RC-I rci RefSeq
Crenarchaeota Aeropyrum pernix ape RefSeq
Staphylothermus marinus smr RefSeq
Ignicoccus hospitalis iho RefSeq
Hyperthermus butylicus hbu RefSeq
Sulfolobus solfataricus sso RefSeq
Sulfolobus tokodaii sto RefSeq
Sulfolobus acidocaldarius sai RefSeq
Metallosphaera sedula mse RefSeq
Pyrobaculum aerophilum pai RefSeq
Pyrobaculum islandicum pis RefSeq
Pyrobaculum calidifontis pcl RefSeq
Pyrobaculum arsenaticum pas RefSeq
Caldivirga maquilingensis cma RefSeq
Thermofilum pendens tpe RefSeq
Nanoarchaeota Nanoarchaeum equitans neq RefSeq


Last updated: November 26, 2007

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